/var/spool/slurmd/job2754935/slurm_script: line 2: --output=/data/reddylab/Hazel/reanalyze/CAL51/EP300/processing/chip_seq/analysis/logs/diffbind.out: No such file or directory Loading required package: GenomicRanges Loading required package: methods Loading required package: stats4 Loading required package: BiocGenerics Loading required package: parallel Attaching package: ‘BiocGenerics’ The following objects are masked from ‘package:parallel’: clusterApply, clusterApplyLB, clusterCall, clusterEvalQ, clusterExport, clusterMap, parApply, parCapply, parLapply, parLapplyLB, parRapply, parSapply, parSapplyLB The following objects are masked from ‘package:stats’: IQR, mad, xtabs The following objects are masked from ‘package:base’: anyDuplicated, append, as.data.frame, cbind, colnames, do.call, duplicated, eval, evalq, Filter, Find, get, grep, grepl, intersect, is.unsorted, lapply, lengths, Map, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, table, tapply, union, unique, unsplit, which, which.max, which.min Loading required package: S4Vectors Attaching package: ‘S4Vectors’ The following objects are masked from ‘package:base’: colMeans, colSums, expand.grid, rowMeans, rowSums Loading required package: IRanges Loading required package: GenomeInfoDb Loading required package: SummarizedExperiment Loading required package: Biobase Welcome to Bioconductor Vignettes contain introductory material; view with 'browseVignettes()'. To cite Bioconductor, see 'citation("Biobase")', and for packages 'citation("pkgname")'. CAL51_EP300_DMSO.rep1 CAL51 EP300 DMSO 1 narrow CAL51_EP300_DMSO.rep2 CAL51 EP300 DMSO 2 narrow CAL51_EP300_DMSO.rep3 CAL51 EP300 DMSO 3 narrow CAL51_EP300_Gefit.rep1 CAL51 EP300 Gefit 1 narrow CAL51_EP300_Gefit.rep2 CAL51 EP300 Gefit 2 narrow CAL51_EP300_Gefit.rep3 CAL51 EP300 Gefit 3 narrow CAL51_EP300_THZ531.rep1 CAL51 EP300 THZ531 1 narrow CAL51_EP300_THZ531.rep2 CAL51 EP300 THZ531 2 narrow CAL51_EP300_THZ531.rep3 CAL51 EP300 THZ531 3 narrow CAL51_EP300_GT.rep1 CAL51 EP300 GT 1 narrow CAL51_EP300_GT.rep2 CAL51 EP300 GT 2 narrow CAL51_EP300_GT.rep3 CAL51 EP300 GT 3 narrow converting counts to integer mode gene-wise dispersion estimates mean-dispersion relationship final dispersion estimates converting counts to integer mode gene-wise dispersion estimates mean-dispersion relationship final dispersion estimates converting counts to integer mode gene-wise dispersion estimates mean-dispersion relationship final dispersion estimates converting counts to integer mode gene-wise dispersion estimates mean-dispersion relationship final dispersion estimates converting counts to integer mode gene-wise dispersion estimates mean-dispersion relationship final dispersion estimates converting counts to integer mode gene-wise dispersion estimates mean-dispersion relationship final dispersion estimates [1] "/data/reddylab/Hazel/reanalyze/CAL51/EP300/processing/chip_seq/analysis/data/chip_seq/diffbind//dba_DBA.RData"