track ILC_plasticity_Parker
shortLabel ILC_plasticity_Parker
longLabel ILC_plasticity_Parker
visibility full
superTrack on

track 00_CCR6_ILC3_atacseq_Maf_KO_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/CCR6_ILC3.atacseq.Maf_KO.rep1.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 00_CCR6_ILC3_atacseq_Maf_KO_rep1_peaks
longLabel 00_CCR6_ILC3_atacseq_Maf_KO_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 00_CCR6_ILC3_atacseq_Maf_KO_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/CCR6_ILC3.atacseq.Maf_KO.rep2.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 00_CCR6_ILC3_atacseq_Maf_KO_rep2_peaks
longLabel 00_CCR6_ILC3_atacseq_Maf_KO_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 01_CCR6_ILC3_atacseq_Maf_WT_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/CCR6_ILC3.atacseq.Maf_WT.rep1.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 01_CCR6_ILC3_atacseq_Maf_WT_rep1_peaks
longLabel 01_CCR6_ILC3_atacseq_Maf_WT_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 01_CCR6_ILC3_atacseq_Maf_WT_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/CCR6_ILC3.atacseq.Maf_WT.rep2.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 01_CCR6_ILC3_atacseq_Maf_WT_rep2_peaks
longLabel 01_CCR6_ILC3_atacseq_Maf_WT_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track aggregatedCCR6_ILC3
shortLabel 00_CCR6_ILC3
longLabel 00_CCR6_ILC3
type bigWig
visibility full
alwaysZero on
autoScale on
maxHeightPixels 100:32:8
aggregate none
showSubtrackColorOnUi on
subGroups factor=CCR6_ILC3
parent ILC_plasticity_Parker
container multiWig

    track 00_CCR6_ILC3_atacseq_Maf_KO_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/CCR6_ILC3.atacseq.Maf_KO.rep1.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 00_CCR6_ILC3_atacseq_Maf_KO_rep1
    longLabel 00_CCR6_ILC3_atacseq_Maf_KO_rep1
    type bigWig
    visibility full
    color 166,206,227
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedCCR6_ILC3

    track 00_CCR6_ILC3_atacseq_Maf_KO_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/CCR6_ILC3.atacseq.Maf_KO.rep2.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 00_CCR6_ILC3_atacseq_Maf_KO_rep2
    longLabel 00_CCR6_ILC3_atacseq_Maf_KO_rep2
    type bigWig
    visibility full
    color 166,206,227
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedCCR6_ILC3

    track 01_CCR6_ILC3_atacseq_Maf_WT_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/CCR6_ILC3.atacseq.Maf_WT.rep1.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 01_CCR6_ILC3_atacseq_Maf_WT_rep1
    longLabel 01_CCR6_ILC3_atacseq_Maf_WT_rep1
    type bigWig
    visibility full
    color 31,120,180
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedCCR6_ILC3

    track 01_CCR6_ILC3_atacseq_Maf_WT_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/CCR6_ILC3.atacseq.Maf_WT.rep2.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 01_CCR6_ILC3_atacseq_Maf_WT_rep2
    longLabel 01_CCR6_ILC3_atacseq_Maf_WT_rep2
    type bigWig
    visibility full
    color 31,120,180
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedCCR6_ILC3

track 02_Nkp46_ILC3_atacseq_Maf_KO_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_KO.rep1.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 02_Nkp46_ILC3_atacseq_Maf_KO_rep1_peaks
longLabel 02_Nkp46_ILC3_atacseq_Maf_KO_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 02_Nkp46_ILC3_atacseq_Maf_KO_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_KO.rep2.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 02_Nkp46_ILC3_atacseq_Maf_KO_rep2_peaks
longLabel 02_Nkp46_ILC3_atacseq_Maf_KO_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 03_Nkp46_ILC3_atacseq_Maf_WT_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_WT.rep1.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 03_Nkp46_ILC3_atacseq_Maf_WT_rep1_peaks
longLabel 03_Nkp46_ILC3_atacseq_Maf_WT_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 03_Nkp46_ILC3_atacseq_Maf_WT_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_WT.rep2.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 03_Nkp46_ILC3_atacseq_Maf_WT_rep2_peaks
longLabel 03_Nkp46_ILC3_atacseq_Maf_WT_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track aggregatedNkp46_ILC3
shortLabel 01_Nkp46_ILC3
longLabel 01_Nkp46_ILC3
type bigWig
visibility full
alwaysZero on
autoScale on
maxHeightPixels 100:32:8
aggregate none
showSubtrackColorOnUi on
subGroups factor=Nkp46_ILC3
parent ILC_plasticity_Parker
container multiWig

    track 02_Nkp46_ILC3_atacseq_Maf_KO_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_KO.rep1.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 02_Nkp46_ILC3_atacseq_Maf_KO_rep1
    longLabel 02_Nkp46_ILC3_atacseq_Maf_KO_rep1
    type bigWig
    visibility full
    color 178,223,138
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3

    track 02_Nkp46_ILC3_atacseq_Maf_KO_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_KO.rep2.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 02_Nkp46_ILC3_atacseq_Maf_KO_rep2
    longLabel 02_Nkp46_ILC3_atacseq_Maf_KO_rep2
    type bigWig
    visibility full
    color 178,223,138
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3

    track 03_Nkp46_ILC3_atacseq_Maf_WT_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_WT.rep1.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 03_Nkp46_ILC3_atacseq_Maf_WT_rep1
    longLabel 03_Nkp46_ILC3_atacseq_Maf_WT_rep1
    type bigWig
    visibility full
    color 51,160,44
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3

    track 03_Nkp46_ILC3_atacseq_Maf_WT_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_WT.rep2.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 03_Nkp46_ILC3_atacseq_Maf_WT_rep2
    longLabel 03_Nkp46_ILC3_atacseq_Maf_WT_rep2
    type bigWig
    visibility full
    color 51,160,44
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3

track 04_DN_ILC3_atcaseq_B6_WT_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/DN_ILC3.atcaseq.B6_WT.rep1.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 04_DN_ILC3_atcaseq_B6_WT_rep1_peaks
longLabel 04_DN_ILC3_atcaseq_B6_WT_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 04_DN_ILC3_atcaseq_B6_WT_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/DN_ILC3.atcaseq.B6_WT.rep2.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 04_DN_ILC3_atcaseq_B6_WT_rep2_peaks
longLabel 04_DN_ILC3_atcaseq_B6_WT_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 05_Nkp46_ILC3_atcaseq_B6_WT_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atcaseq.B6_WT.rep1.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 05_Nkp46_ILC3_atcaseq_B6_WT_rep1_peaks
longLabel 05_Nkp46_ILC3_atcaseq_B6_WT_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 05_Nkp46_ILC3_atcaseq_B6_WT_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atcaseq.B6_WT.rep2.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 05_Nkp46_ILC3_atcaseq_B6_WT_rep2_peaks
longLabel 05_Nkp46_ILC3_atcaseq_B6_WT_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 06_Nkp46_ILC3_atacseq_Maf_WT_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_WT.rep1.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 06_Nkp46_ILC3_atacseq_Maf_WT_rep1_peaks
longLabel 06_Nkp46_ILC3_atacseq_Maf_WT_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 06_Nkp46_ILC3_atacseq_Maf_WT_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_WT.rep2.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 06_Nkp46_ILC3_atacseq_Maf_WT_rep2_peaks
longLabel 06_Nkp46_ILC3_atacseq_Maf_WT_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 07_Nkp46_ILC3_atacseq_Maf_KO_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_KO.rep1.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 07_Nkp46_ILC3_atacseq_Maf_KO_rep1_peaks
longLabel 07_Nkp46_ILC3_atacseq_Maf_KO_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 07_Nkp46_ILC3_atacseq_Maf_KO_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_KO.rep2.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 07_Nkp46_ILC3_atacseq_Maf_KO_rep2_peaks
longLabel 07_Nkp46_ILC3_atacseq_Maf_KO_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 08_Nkp46_ILC3_atcaseq_Rorc_GFP_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atcaseq.Rorc_GFP.rep1.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 08_Nkp46_ILC3_atcaseq_Rorc_GFP_rep1_peaks
longLabel 08_Nkp46_ILC3_atcaseq_Rorc_GFP_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 08_Nkp46_ILC3_atcaseq_Rorc_GFP_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atcaseq.Rorc_GFP.rep2.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 08_Nkp46_ILC3_atcaseq_Rorc_GFP_rep2_peaks
longLabel 08_Nkp46_ILC3_atcaseq_Rorc_GFP_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 09_Nkp46_RORgtlo_atacseq_Rorc_GFP_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_RORgtlo.atacseq.Rorc_GFP.rep1.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 09_Nkp46_RORgtlo_atacseq_Rorc_GFP_rep1_peaks
longLabel 09_Nkp46_RORgtlo_atacseq_Rorc_GFP_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 09_Nkp46_RORgtlo_atacseq_Rorc_GFP_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_RORgtlo.atacseq.Rorc_GFP.rep2.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 09_Nkp46_RORgtlo_atacseq_Rorc_GFP_rep2_peaks
longLabel 09_Nkp46_RORgtlo_atacseq_Rorc_GFP_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 10_ILC1_atacseq_Rorc_GFP_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/ILC1.atacseq.Rorc_GFP.rep1.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 10_ILC1_atacseq_Rorc_GFP_rep1_peaks
longLabel 10_ILC1_atacseq_Rorc_GFP_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 10_ILC1_atacseq_Rorc_GFP_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/ILC1.atacseq.Rorc_GFP.rep2.R1.masked.dedup.sorted_peaks.trunked_scores.narrowPeak.bb
shortLabel 10_ILC1_atacseq_Rorc_GFP_rep2_peaks
longLabel 10_ILC1_atacseq_Rorc_GFP_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track aggregatedDN_ILC3
shortLabel 02_DN_ILC3
longLabel 02_DN_ILC3
type bigWig
visibility full
alwaysZero on
autoScale on
maxHeightPixels 100:32:8
aggregate none
showSubtrackColorOnUi on
subGroups factor=DN_ILC3
parent ILC_plasticity_Parker
container multiWig

    track 04_DN_ILC3_atcaseq_B6_WT_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/DN_ILC3.atcaseq.B6_WT.rep1.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 04_DN_ILC3_atcaseq_B6_WT_rep1
    longLabel 04_DN_ILC3_atcaseq_B6_WT_rep1
    type bigWig
    visibility full
    color 161,105,40
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 04_DN_ILC3_atcaseq_B6_WT_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/DN_ILC3.atcaseq.B6_WT.rep2.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 04_DN_ILC3_atcaseq_B6_WT_rep2
    longLabel 04_DN_ILC3_atcaseq_B6_WT_rep2
    type bigWig
    visibility full
    color 161,105,40
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 05_Nkp46_ILC3_atcaseq_B6_WT_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atcaseq.B6_WT.rep1.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 05_Nkp46_ILC3_atcaseq_B6_WT_rep1
    longLabel 05_Nkp46_ILC3_atcaseq_B6_WT_rep1
    type bigWig
    visibility full
    color 189,146,90
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 05_Nkp46_ILC3_atcaseq_B6_WT_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atcaseq.B6_WT.rep2.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 05_Nkp46_ILC3_atcaseq_B6_WT_rep2
    longLabel 05_Nkp46_ILC3_atcaseq_B6_WT_rep2
    type bigWig
    visibility full
    color 189,146,90
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 06_Nkp46_ILC3_atacseq_Maf_WT_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_WT.rep1.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 06_Nkp46_ILC3_atacseq_Maf_WT_rep1
    longLabel 06_Nkp46_ILC3_atacseq_Maf_WT_rep1
    type bigWig
    visibility full
    color 214,189,141
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 06_Nkp46_ILC3_atacseq_Maf_WT_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_WT.rep2.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 06_Nkp46_ILC3_atacseq_Maf_WT_rep2
    longLabel 06_Nkp46_ILC3_atacseq_Maf_WT_rep2
    type bigWig
    visibility full
    color 214,189,141
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 07_Nkp46_ILC3_atacseq_Maf_KO_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_KO.rep1.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 07_Nkp46_ILC3_atacseq_Maf_KO_rep1
    longLabel 07_Nkp46_ILC3_atacseq_Maf_KO_rep1
    type bigWig
    visibility full
    color 237,234,194
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 07_Nkp46_ILC3_atacseq_Maf_KO_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atacseq.Maf_KO.rep2.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 07_Nkp46_ILC3_atacseq_Maf_KO_rep2
    longLabel 07_Nkp46_ILC3_atacseq_Maf_KO_rep2
    type bigWig
    visibility full
    color 237,234,194
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 08_Nkp46_ILC3_atcaseq_Rorc_GFP_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atcaseq.Rorc_GFP.rep1.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 08_Nkp46_ILC3_atcaseq_Rorc_GFP_rep1
    longLabel 08_Nkp46_ILC3_atcaseq_Rorc_GFP_rep1
    type bigWig
    visibility full
    color 181,200,184
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 08_Nkp46_ILC3_atcaseq_Rorc_GFP_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.atcaseq.Rorc_GFP.rep2.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 08_Nkp46_ILC3_atcaseq_Rorc_GFP_rep2
    longLabel 08_Nkp46_ILC3_atcaseq_Rorc_GFP_rep2
    type bigWig
    visibility full
    color 181,200,184
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 09_Nkp46_RORgtlo_atacseq_Rorc_GFP_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_RORgtlo.atacseq.Rorc_GFP.rep1.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 09_Nkp46_RORgtlo_atacseq_Rorc_GFP_rep1
    longLabel 09_Nkp46_RORgtlo_atacseq_Rorc_GFP_rep1
    type bigWig
    visibility full
    color 121,167,172
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 09_Nkp46_RORgtlo_atacseq_Rorc_GFP_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_RORgtlo.atacseq.Rorc_GFP.rep2.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 09_Nkp46_RORgtlo_atacseq_Rorc_GFP_rep2
    longLabel 09_Nkp46_RORgtlo_atacseq_Rorc_GFP_rep2
    type bigWig
    visibility full
    color 121,167,172
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 10_ILC1_atacseq_Rorc_GFP_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/ILC1.atacseq.Rorc_GFP.rep1.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 10_ILC1_atacseq_Rorc_GFP_rep1
    longLabel 10_ILC1_atacseq_Rorc_GFP_rep1
    type bigWig
    visibility full
    color 40,135,161
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

    track 10_ILC1_atacseq_Rorc_GFP_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/ILC1.atacseq.Rorc_GFP.rep2.R1.masked.dedup.sorted.rpkm.bw
    shortLabel 10_ILC1_atacseq_Rorc_GFP_rep2
    longLabel 10_ILC1_atacseq_Rorc_GFP_rep2
    type bigWig
    visibility full
    color 40,135,161
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedDN_ILC3

track Nkp46_ILC3_cutandrun_H3K27ac_merged_20kb_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27ac.merged.bb
shortLabel Nkp46_ILC3_cutandrun_H3K27ac_merged_20kb_peaks
longLabel Nkp46_ILC3_cutandrun_H3K27ac_merged_20kb_peaks
type bigBed 3 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_WT_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27ac.Maf_WT.rep1.with_IgG_control_peaks.bb
shortLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_WT_rep1_peaks
longLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_WT_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_WT_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27ac.Maf_WT.rep2.with_IgG_control_peaks.bb
shortLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_WT_rep2_peaks
longLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_WT_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_KO_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27ac.Maf_KO.rep1.with_IgG_control_peaks.bb
shortLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_KO_rep1_peaks
longLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_KO_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_KO_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27ac.Maf_KO.rep2.with_IgG_control_peaks.bb
shortLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_KO_rep2_peaks
longLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_KO_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track aggregatedNkp46_ILC3_cutandrun_H3K27ac
shortLabel 03_Nkp46_ILC3.cutandrun.H3K27ac
longLabel 03_Nkp46_ILC3.cutandrun.H3K27ac
type bigWig
visibility full
alwaysZero on
autoScale on
maxHeightPixels 100:32:8
aggregate none
showSubtrackColorOnUi on
subGroups factor=Nkp46_ILC3.cutandrun.H3K27ac
parent ILC_plasticity_Parker
container multiWig

    track 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_WT_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27ac.Maf_WT.rep1.dups_marked.dedup.spike_in_norm.bw
    shortLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_WT_rep1
    longLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_WT_rep1
    type bigWig
    visibility full
    color 251,154,153
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3_cutandrun_H3K27ac

    track 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_WT_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27ac.Maf_WT.rep2.dups_marked.dedup.spike_in_norm.bw
    shortLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_WT_rep2
    longLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_WT_rep2
    type bigWig
    visibility full
    color 251,154,153
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3_cutandrun_H3K27ac

    track 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_KO_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27ac.Maf_KO.rep1.dups_marked.dedup.spike_in_norm.bw
    shortLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_KO_rep1
    longLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_KO_rep1
    type bigWig
    visibility full
    color 227,26,28
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3_cutandrun_H3K27ac

    track 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_KO_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27ac.Maf_KO.rep2.dups_marked.dedup.spike_in_norm.bw
    shortLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_KO_rep2
    longLabel 03_Nkp46_ILC3_cutandrun_H3K27ac_Maf_KO_rep2
    type bigWig
    visibility full
    color 227,26,28
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3_cutandrun_H3K27ac

track Nkp46_ILC3_cutandrun_H3K27me3_merged_20kb_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27me3.merged.bb
shortLabel Nkp46_ILC3_cutandrun_H3K27me3_merged_20kb_peaks
longLabel Nkp46_ILC3_cutandrun_H3K27me3_merged_20kb_peaks
type bigBed 3 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_WT_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27me3.Maf_WT.rep1.20kb_with_IgG_control_peaks.broadPeak.bb
shortLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_WT_rep1_peaks
longLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_WT_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_WT_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27me3.Maf_WT.rep2.20kb_with_IgG_control_peaks.broadPeak.bb
shortLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_WT_rep2_peaks
longLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_WT_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_KO_rep1_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27me3.Maf_KO.rep1.20kb_with_IgG_control_peaks.broadPeak.bb
shortLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_KO_rep1_peaks
longLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_KO_rep1_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_KO_rep2_peaks
bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27me3.Maf_KO.rep2.20kb_with_IgG_control_peaks.broadPeak.bb
shortLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_KO_rep2_peaks
longLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_KO_rep2_peaks
type bigBed 6 .
visibility dense
color 0,0,128
parent ILC_plasticity_Parker

track aggregatedNkp46_ILC3_cutandrun_H3K27me3
shortLabel 04_Nkp46_ILC3.cutandrun.H3K27me3
longLabel 04_Nkp46_ILC3.cutandrun.H3K27me3
type bigWig
visibility full
alwaysZero on
autoScale on
maxHeightPixels 100:32:8
aggregate none
showSubtrackColorOnUi on
subGroups factor=Nkp46_ILC3.cutandrun.H3K27me3
parent ILC_plasticity_Parker
container multiWig

    track 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_WT_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27me3.Maf_WT.rep1.dups_marked.dedup.spike_in_norm.bw
    shortLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_WT_rep1
    longLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_WT_rep1
    type bigWig
    visibility full
    color 253,191,111
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3_cutandrun_H3K27me3

    track 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_WT_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27me3.Maf_WT.rep2.dups_marked.dedup.spike_in_norm.bw
    shortLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_WT_rep2
    longLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_WT_rep2
    type bigWig
    visibility full
    color 253,191,111
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3_cutandrun_H3K27me3

    track 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_KO_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27me3.Maf_KO.rep1.dups_marked.dedup.spike_in_norm.bw
    shortLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_KO_rep1
    longLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_KO_rep1
    type bigWig
    visibility full
    color 255,127,0
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3_cutandrun_H3K27me3

    track 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_KO_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.H3K27me3.Maf_KO.rep2.dups_marked.dedup.spike_in_norm.bw
    shortLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_KO_rep2
    longLabel 04_Nkp46_ILC3_cutandrun_H3K27me3_Maf_KO_rep2
    type bigWig
    visibility full
    color 255,127,0
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3_cutandrun_H3K27me3

track aggregatedNkp46_ILC3_cutandrun_IgG
shortLabel 05_Nkp46_ILC3.cutandrun.IgG
longLabel 05_Nkp46_ILC3.cutandrun.IgG
type bigWig
visibility full
alwaysZero on
autoScale on
maxHeightPixels 100:32:8
aggregate none
showSubtrackColorOnUi on
subGroups factor=Nkp46_ILC3.cutandrun.IgG
parent ILC_plasticity_Parker
container multiWig

    track 05_Nkp46_ILC3_cutandrun_IgG_Maf_WT_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.IgG.Maf_WT.rep1.dups_marked.dedup.spike_in_norm.bw
    shortLabel 05_Nkp46_ILC3_cutandrun_IgG_Maf_WT_rep1
    longLabel 05_Nkp46_ILC3_cutandrun_IgG_Maf_WT_rep1
    type bigWig
    visibility full
    color 202,178,214
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3_cutandrun_IgG

    track 05_Nkp46_ILC3_cutandrun_IgG_Maf_KO_rep1
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.IgG.Maf_KO.rep1.dups_marked.dedup.spike_in_norm.bw
    shortLabel 05_Nkp46_ILC3_cutandrun_IgG_Maf_KO_rep1
    longLabel 05_Nkp46_ILC3_cutandrun_IgG_Maf_KO_rep1
    type bigWig
    visibility full
    color 106,61,154
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3_cutandrun_IgG

    track 05_Nkp46_ILC3_cutandrun_IgG_Maf_KO_rep2
    bigDataUrl http://trackhub.genome.duke.edu/reddylab/collab/ilc_morgan/mm10/data/Nkp46_ILC3.cutandrun.IgG.Maf_KO.rep2.dups_marked.dedup.spike_in_norm.bw
    shortLabel 05_Nkp46_ILC3_cutandrun_IgG_Maf_KO_rep2
    longLabel 05_Nkp46_ILC3_cutandrun_IgG_Maf_KO_rep2
    type bigWig
    visibility full
    color 106,61,154
    autoScale on
    maxHeightPixels 100:32:8
    parent aggregatedNkp46_ILC3_cutandrun_IgG